Publications

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Cover Figures

Books & Chapters
1. Swanson EA, Hee MR, Tearney GJ, Bouma BE, Boppart SA, Izatt JA, Fujimoto JG, Brezinski ME, Shuman JS, Puliafito CA. Optical Coherence Tomography: Principles, Instrumentation, and Biological Applications. In Biomedical Optical Instrumentation and Laser-Assisted Biotechnology, Ed. Scheggi AM, Martellucci S, Chester AN, Pratesi R, Kluwer Academic Publishers, 1996. PDF
2. Boppart SA, Brezinski ME, Fujimoto JG. Optical Coherence Tomography Imaging in Developmental Biology. In Methods in Molecular Biology, Vol. 135: Developmental Biology Protocols, Volume 1. Tuan RS, Lo CW, Eds., Humana Press, Inc., Totowa, NJ, 2000. PDF
3. Boppart SA, Brezinski ME, Fujimoto JG. Developmental Biology. In The Handbook of Optical Coherence Tomography, Bouma BE, Tearney JG, Eds., Marcel Dekker, Inc., New York, NY, 2001 n/a
4. Boppart SA, Brezinski ME, Fujimoto JG. Surgical Guidance and Intervention. In The Handbook of Optical Coherence Tomography, Bouma BE, Tearney JG, Eds., Marcel Dekker, Inc., New York, NY, 2001. n/a
5. Boppart SA. Optical imaging and microscopy: Technicques and Advanced Systems. In Techniques and Advanced Systems, P. Torok, F-J Kao, Ed., Springer-Verlag Publishers, Berlin, 2003. n/a
6. Boppart SA. Imaging: Optical Coherence Tomography. In Encyclopedia of Modern Optics, Guenther RD, Steel DG, Bayvel L, Eds., Elsevier, Oxford, pp. 193-205, 2004. PDF
7. Oldenburg Al, Boppart SA. Optical Coherence Tomography. In McGraw-Hill 2005 Yearbook of Science & Technology. McGraw-Hill Companies, New York, NY, pp. 244-246, 2005. n/a
8. Boppart SA Suslick KS.  Optical Coherence Tomography Contrast Agents for Cardiovascular Imaging.  In Optical Coherence Tomography for Cardiovascular Applications,  In press, 2005. n/a
9. Marks DL, Boppart SA. Nonlinear interferometric vibrational imaging: a method for distinguishing coherent anti-Stokes Raman scattering from nonresonant four-wave-mixing processes and retrieving Raman spectra using broadband pulses. In New Approaches in Biomedical Spectroscopy, Kneipp K, Aroca R, Kneipp H, Wentrup-Byrne E, Editors, American Chemical Society, Washington, DC, pp. 236-258, 2007. n/a
10. Zysk AM,Boppart SA.  Optical Coherence Tomography.  In Optical Imaging and Microscopy, Second Edition,  Torok P, Kao FJ, Eds., Springer-Verlag Publishers, Berlin, 2007. n/a
11. Boppart SAOptical Coherence Tomography with Applications to Cancer Imaging. In Biophotonics, Pavesi L, Fauchet PM, Eds., Springer-Verlag Publishers, Berlin, pp. 127-150, 2008. n/a
12. Marks DL, Ralston TS,Boppart SA. Data Analysis and Signal Post-Processing for Optical Coherence Tomography. In Optical Coherence Tomography: Technology and Applications, Drexler W, Fujimoto JG, Eds., Springer Verlag, 2008. n/a
13. Oldenburg AL, Applegate BE, Izatt JA,Boppart SA. Molecular Optical Coherence Tomography Contrast Enhancement and Imaging. In Optical Coherence Tomography: Technology and Applications, Drexler W, Fujimoto JG, Eds., Springer Verlag, 2008. n/a
14. Boppart SA, Yang Y, Wang RK.  Optical Coherence Tomography in Tissue Engineering. In Optical Coherence Tomography: Technology and Applications,  Drexler W, Fujimoto JG, Eds., Springer Verlag, 2008. n/a
15. Davis AM, Boppart SA, Izatt JA.  Optical Coherence Tomography Applications in Developmental Biology.  In Optical Coherence Tomography: Technology and Applications,  Drexler W, Fujimoto JG, Eds., Springer Verlag, 2008. n/a
16. Adie SG, Ralston TS, Marks DL, Davis BJ, Carney PS, Boppart SA. Interferometric synthetic aperture microscopy: computed inverse scattering for coherence imaging, In Biological Applications of Light Scattering, Wax A, Bachman V, Eds., McGraw-Hill, 2009. n/a
17. Adie SG, Boppart SA. Optical Coherence Tomography for Cancer Detection. In Optical Imaging of Cancer, Rosenthal E, Zin KR, Eds., Springer, 2009. n/a
18. Graf B, Boppart SA. Integrated optical coherence and multiphoton microscopy for three-dimensional engineered tissue constructs. In Methods in Molecular Biology, Papkovsky DB, Ed., Humana Press, 591:211-227, 2010. n/a
19. John R, Boppart SA. Scattering, absorbing, and modulating contrast agents, In Nanobiophotonics, Popescu G, Ed., McGraw-Hill, 2010. n/a
20. Sharma U, Boppart SA. Optical low-coherence interferometric techniques for applications in nanomedicine. In Nanobiophotonics , Popescu G, Ed., McGraw-Hill, 2010. n/a
21. Benalcazar W, Boppart SA. Optical coherence tomography for real-time surgical pathology. In Handbook of Biophotonics: Pathology, Surgical Pathology (Optical Biopsy Analysis), Popp J, Ed., Wiley-VCH, In press, 2010. n/a
22. Tu H, Jiang Z, Chowdary P, Benalcazar W, Chaney EJ, Marks DL, Gruebele M, Boppart SA.  Nonlinear Interferometric Vibrational Imaging and Spectroscopy.  Handbook of Biophotonics, 2nd Edition, Vo Dinh T, Ed., CRC Press, In press, 2012. n/a
23. Jung W, Boppart SA.  Optical coherence tomography for rapid tissue screening and directed histological sectioning. Photonics in Medicine & Pathology: New Approaches to Cell and Tissue Imaging, Cohen S, Ed. Institute of Physics Press, In press, 2012. n/a
24. Zhao Y, Graf BW, Boppart SA.  Optical Coherence Tomography Overview and Applications.  In Optical Techniques in Regenerative Medicine, Morgan SP, Ed., CRC Press, In press, 2012. n/a
25. Carney PS, Boppart SA.  Interferometric Synthetic Aperture Microscopy.  In Computational Optical Imaging, Anastasio M, Ed., In preparation, 2012. n/a

Invited Publications
1. Boppart SA, Drexler W, Morgner U, Kartner FX, Fujimoto JG. Ultrahigh Resolution and Spectroscopic Optical Coherence Tomography Imaging of Cellular Morphology and Function. Proc. Inter-Institute Workshop on In Vivo Optical Imaging at the National Institutes of Health. Ed. Gandjbakhche AH. September 16-17, pp. 56-61, 1999. PubMed
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2. Fujimoto JG Boppart SA, Pitris C, Brezinski ME. Optical coherence tomography: a new technology for biomedical imaging. Japanese Journal of Laser Surgery and Medicine 20:141-168, 1999.n/a n/a
3. Fujimoto JG, Pitris C, Boppart SA, Brezinski ME. Optical Coherence Tomography: An Emerging Technology for Biomedical Imaging and Optical Biopsy. Neoplasia 2(1):1-17, 2000. PubMed
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4. Boppart SA, Herrmann JM, Fujimoto JG. Optical Coherence Tomography for Surgical Diagnostics, Guidance, and Intervention. Invited to Medical Imaging International 10:14-20, 2000.n/a n/a
5. Boppart SA, Herrmann JM, Pitris C, Stamper DL, Brezinski ME, Fujimoto JG. Real-Time Optical Coherence Tomography for Minimally-Invasive Imaging of Prostate Ablation. Invited to Computer Aided Surgery 6:94-103 (2001). PubMed
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6. Boppart SA. Looking below the surface. SPIE, The International Society for Optical Engineering, OE Magazine, pp. 28-31, September 2002.n/a PDF
7. Carmichael SW, Boppart SA. Optical projection tomography (Review). Microscopy Today, 10(5):3, 2002.n/a PDF
8. Boppart SA. Optical coherency tomography: technology and applications for neuroimaging. Psychophysiology 40:529-542, 2003.PubMed Abstract PDF
9. Boppart SA. Optical coherence tomography: Principles, applications, and advances. Minerva Biotecnologica, 16:211-237, 2004.n/a PDF
10. Boppart SA, Oldenburg AL, Xu C, Marks DL. Optical probes and techniques for molecular contrast enhancement in coherence imaging. Article and Cover Figure. J Biomedical Optics, 10:041208, 2005. PubMed Abstract PDF
11. Zysk AM, Nguyen FT, Oldenburg AL, Marks DL, Boppart SA. Optical coherence tomography: a review of clinical development from bench to bedside. J Biomedical Optics, 12(5):051403, 2007. n/a PDF
12. Oldenburg AL, Xu C, Boppart SA. Spectroscopic optical coherence tomography and microscopy. IEEE J Selected Topics in Quantum Electronics: Biophotonics, 13:1629-1640, 2007. n/a PDF
13. Boppart SA. Intraoperative optical imaging and guidance translates to breast cancer research. SPIE Newsroom, 10.1117/2.1200804.1153, 2008. n/a PDF
14. Davis BJ, Marks DL, Ralston TS, Carney PS, Boppart SA. Interferometric synthetic aperture microscopy: computed imaging for scanned coherent microscopy. Sensors, 8:3903-3931, 2008. n/a PDF
15. Tu H, Boppart SA. Targeted pulse-energy routing in fiber drives non-supercontinuum applications. Laser Focus World, July,56-59, 2009. n/a PDF
16. Oldenburg AL, Hansen MN, Ralston TS, Wei A, Boppart SA. Imaging gold nanorods in excised human breast carcinoma by spectroscopic optical coherence tomography. J. Mater. Chem, 19:6407-6411, 2009. n/a PDF
17. Adie SG, Ahmad A, Chaney EJ, Sharma U, Boppart SA. Toward freehand image acquisition in optical coherence tomography. SPIE Newsroom, 10.1117/2.1200906.1687, 2009. n/a PDF
18. Graf B, and Boppart SA. Detecting action-potential-correlated scattering changes in single neurons. SPIE Newsroom, 10.1117/2.1200909.1810, 2009. n/a PDF
19. Liang X, Graf B, Boppart SA. Multimodality microscopy for imaging three-dimensional engineered and natural tissues. J. Biophotonics, 2:643-655, 2009. PubMed
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20. Boustany NN, Boppart SA, Backman V.  Microscopic imaging and spectroscopy with scattered light.  Annu. Rev. Biomed. Eng., 12:285-314, 2010 PubMed
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21. Ralston TS, Charvat GL, Adie SG, Davis BJ, Carney PS, Boppart SA.  Interferometric synthetic aperture microscopy: Microscopic laser radar.  Optics and Photonics News, Optical Society of America, 21:32-38, 2010. n/a PDF
22. Ding H, Wang Z, Nguyen FT, Boppart SA, Millet LJ, Gillette MU, Liu J, Boppart MD, Popescu G.  Fourier transform light scattering (FTLS) of cells and tissues.  J. Comput. Theor. Nanosci., 7:1-11, 2010. n/a PDF
23. Carney PS, Boppart SA.  Interferometric synthetic aperture microscopy eliminates OCT compromises.  Laser Focus World, 47:35-39, 2011. n/a n/a
24. Carney PS, Boppart SA.  Depth of field and resolution meet in new OCT approach.  BioOptics World, 4:19-23, 2011. n/a PDF
25. John R, Boppart SA.  Magnetomotive molecular nanoprobes.  Current Medicinal Chemistry, Special issue on Impact of Nanotechnology on Medicinal Chemistry and Drug Discovery,18:2103-2114, 2011. PubMed
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26. Liang X, Graf BW, Boppart SA.  In vivo multiphoton microscopy for investigating biomechanical properties in human skin.  Cellular and Molecular Bioengineering, 4:231-238, 2011. n/a PDF
27. Benalcazar WA, Boppart SA.  Nonlinear inferometric vibrational imaging for fast label-free visualization of molecular domains in skin.  Analytical and Bioanalytical Chemistry, 400:2817-2825, 2011. PubMed
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28. Jung W, Boppart SA.  Optical coherence tomography for rapid tissue screening and directed histological sectioning. Analytical Cellular Pathology, In press, 2011. PubMed
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29. Zhao Y, Graf BW, Chaney EJ, Mahmassani Z, Antoniadou E, DeVolder R, Kong H, Boppart MD, Boppart SA.  Integrated multimodal optical microscopy for structural and functional imaging of engineered and natural skin.  J. Biophotonics 5, No. 5–6, 437–448 (2012). n/a PDF

Contributed Publications
1. Boppart SA, Wheeler BC, Wallace CS. A flexible perforated microelectrode array for extended neural recordings. IEEE Trans Biomed Engr 39(1):37-42, 1992. PubMed
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2. Roach WP, Rogers ME, Rockwell BA, Boppart SA, Stein CD, Bramlette CM. Ultrashort laser pulse effects in ocular and related media. Aviation Space Environ Med 65(5 Suppl):A100-A107, 1994. PubMed
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3. Kennedy P, Boppart SA, Hammer DX, Rockwell BA, Noojin GD, Roach WP. A first-order model for computation of laser-induced breakdown thresholds in ocular and aqueous media: Part II - Comparison to Experiment. IEEE J Quant Elec QE-31:2250-2257, 1995.n/a PDF
4. Bouma BE, Tearney GJ, Boppart SA, Hee MR, Brezinski ME, Fujimoto JG. High resolution optical coherence tomographic imaging using a mode-locked Ti:Al2O3 laser source. Opt Lett 20(13):1486-1488, 1995. n/a PDF
5. Fujimoto JG, Brezinski ME, Tearney GJ, Boppart SA, Bouma BE, Hee MR, Southern JF, Swanson EA. Optical biopsy and imaging using optical coherence tomography. Nature Med 1(9):970-972, 1995. PubMed
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6. Brezinski ME, Tearney GJ, Bouma BE, Boppart SA, Hee MR, Swanson EA, Southern JF, Fujimoto JG. Imaging of coronary artery microstructure with optical coherence tomography. Am J Cardiol 77(1):92-93, 1996. PubMed
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7. Tearney GJ, Boppart SA, Bouma BE, Brezinski ME, Weissman NJ, Southern JF, Fujimoto JG. Scanning single-mode fiber optic catheter-endoscope for optical coherence tomography. Opt Lett 21(7):543-545, 1996.n/a PDF
8. Bouma BE, Tearney GJ, Brezinsky IP, Golubovic B, Boppart SA, Fujimoto JG. Optical coherence tomographic imaging using a mode locked Cr4+:forsterite laser source. Ultrafast Optics Conference Proceedings, Tenth International Topical Meeting, Springer-Verlag, May, 1996.n/a n/a
9. Boppart SA, Brezinski ME, Bouma BE, Tearney GJ, Fujimoto JG. Investigation of developing embryonic morphology using optical coherence tomography. Dev Biol 177:54-64, 1996. PubMed
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10. Tearney GJ, Bouma BE, Boppart SA, Golubovic B, Swanson EA, Fujimoto JG. Rapid acquisition of in vivo biological images using optical coherence tomography. Opt Lett 21(17):1408-1410, 1996.n/a PDF
11. Boppart SA, Bouma BE, Brezinski ME, Tearney GJ, Fujimoto JG. Imaging developing neural morphology using optical coherence tomography. J Neurosci Meth 70:65-72, 1996. PubMed
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12. Tearney GJ, Brezinski ME, Boppart SA, Bouma BE, Weissman NJ, Southern JF, Swanson EA, Fujimoto JG. Catheter-based optical imaging of a human coronary artery. Circulation 94:3013, 1996.n/a PDF
13. Tearney GJ, Brezinski ME, Southern JF, Bouma BE, Boppart SA, Fujimoto JG. Optical biopsy in human urologic tissue using optical coherence tomography. J Urol 157:1915-1919, 1997.PubMed Abstract PDF
14. Toth CA, Birngruber R, Boppart SA, Hee MR, Fujimoto JG, DiCarlo CD, Swanson EA, Cain CP, Narayan D, Roach WP. Argon laser retinal lesions evaluation in vivo by optical coherence tomography. Am J Ophthalmol 123:188-198, 1997. PubMed
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15. Boppart SA, Tearney GJ, Bouma BE, Brezinski ME, Southern JF, Fujimoto JG. Noninvasive assessment of the developing xenopus cardiovascular system using optical coherence tomography. Proc Natl Acad Sci, USA 94:4256-4261, 1997. PubMed
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16. Tearney GJ, Brezinski ME, Bouma BE, Boppart SA, Pitris C, Southern JF, Fujimoto JG. In vivo endoscopic optical biopsy with optical coherence tomography. Science 276:2037-2039, 1997. PubMed
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17. Zuclich JA, Schuschereba ST, Zwick H, Boppart SA, Fujimoto JG, Cheney FE, Stuck BE. A comparison of laser-induced retinal damage from infrared wavelengths to that from visible wavelengths. Lasers Light 8(1):15-29, 1997.n/a PDF
18. Brezinski ME, Tearney GJ, Boppart SA, Swanson EA, Southern JF, Fujimoto JG. Optical biopsy with optical coherence tomography: feasibility for surgical diagnostics. J Surg Res 71:32-40, 1997. PubMed
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19. Tearney GJ, Brezinski ME, Southern JF, Bouma BE, Boppart SA, Fujimoto JG. Optical biopsy in human gastrointestinal tissue using optical coherence tomography. Am J Gastro 92(10):1800-1804, 1997. PubMed
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20. Brezinski ME, Tearney GJ, Weissman NJ, Boppart SA, Bouma BE, Hee MR, Weyman AE, Swanson EA, Southern JF, Fujimoto JG. Assessing Atherosclerotic plaque morphology: comparison of optical coherence tomography and high frequency intravascular ultrasound. Heart 77:397-403, 1997. PubMed
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21. Boppart SA, Bouma BE, Pitris C, Tearney GJ, Brezinski ME, Fujimoto JG. Forward-imaging instruments for optical coherence tomographic imaging. Opt Lett 22(21):1618-1620, 1997.n/a PDF
22. Toth CA, Narayan DG, Boppart SA, Hee MR, Fujimoto JG, Birngruber R, Cain CP, DiCarlo CD, Roach WP. A comparison of retinal morphology viewed by optical coherence tomography and by light microscopy. Arch Ophthalmol 115(11):1425-1428, 1997. PubMed
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23. Fujimoto JG, Bouma BE, Tearney GJ, Boppart SA, Pitris C, Southern JF, Brezinski ME. New technology for high-speed and high-resolution optical coherence tomography. Ann NY Acad Sci 838:95-107, 1998. PubMed
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24. Brezinski ME, Tearney GJ, Bouma BE, Boppart SA, Pitris C, Southern JF, Fujimoto JG. Optical biopsy with optical coherence tomography. Ann NY Acad Sci 838:68-74, 1998. PubMed
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25. Boppart SA, Bouma BE, Pitris C, Tearney GJ, Southern JF, Brezinski ME, Fujimoto JG. Intraoperative assessment of microsurgery with three-dimensional optical coherence tomography. Radiology 208:81-86, 1998. PubMed
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26. Boppart SA, Bouma BE, Pitris C, Southern JF, Brezinski ME, Fujimoto JG. In vivo cellular optical coherence tomography imaging. Nature Med 4(7):861-864, 1998. PubMed
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27. Herrmann JM, Brezinski ME, Bouma BE, Boppart SA, Pitris C, Southern JF, Fujimoto JG. Two- and three-dimensional high-resolution imaging of the human oviduct with optical coherence tomography. Fertil Steril 70(1):155-158, 1998. PubMed
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28. Tearney GJ, Brezinski ME, Southern JF, Bouma BE, Boppart SA, Fujimoto JG. Optical biopsy in human pancreatobiliary tissue using optical coherence tomography. Digest Dis Sci 43(6):1193-1199, 1998. PubMed
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29. Boppart SA, Brezinski ME, Pitris C, Fujimoto JG. Optical coherence tomography for neurosurgical imaging of human intracortical melanoma. Neurosurgery 43(4):834-841, 1998. PubMed
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30. Pitris C, Goodman AK, Boppart SA, Libus JJ, Fujimoto JG, Brezinski ME. High resolution imaging of gynecological neoplasms using optical coherence tomography. Obstet Gynecol, 93:135-139, 1999. PubMed
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31. Herrmann JM, Pitris C, Bouma BE, Boppart SA, Jesser C, Stamper DL, Fujimoto JG, Brezinski ME. High resolution imaging of normal and osteoarthritic cartilage with optical coherence tomography. J Rheumatol 26(3):627-635, 1999. PubMed
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32. Boppart SA, Herrmann JM, Pitris C, Stamper DL, Brezinski ME, Fujimoto JG. High-resolution optical coherence tomography guided laser ablation of surgical tissue. J Surg Res 82:275-284, 1999. PubMed
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33. Boppart SA, Deutsch TF, Rattner DW. Optical Imaging technology in minimally invasive surgery. Surg Endosc 13:718-722, 1999. PubMed
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34. Fujimoto JG, Boppart SA, Tearney GJ, Bouma BE, Pitris C, Brezinski ME. High resolution in vivo intraarterial imaging with optical coherence tomography. Heart 82(2):128-133, 1999. PubMed
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35. Boppart SA, Goodman AK, Pitris C, Jesser C, Libis JJ, Brezinski ME, Fujimoto JG. High-resolution imaging of endometriosis and ovarian carcinoma with optical coherence tomography: feasibility for laparoscopic-based imaging. Br J Obstet Gyn 106:1071-1077, 1999. PubMed
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36. DiCarlo CD, Roach WP, Gagliano DA, Boppart SA, Hammer DX, Cox AB, Fujimoto JG. Comparison of optical coherence tomography imaging of cataracts with histopathology. J Biomed Opt 4(4):450-458, 1999.n/a PDF
37. Drexler W, Morgner U, Kartner FX, Pitris C, Boppart SA, Li X, Ippen EP, Fujimoto JG. In vivo ultrahigh resolution optical coherence tomography. Opt Lett 24(17):1221-1223, 1999.n/a PDF
38. Jesser CA, Boppart SA, Pitris C, Stamper DL, Nielsen GP, Brezinski ME, Fujimoto JG. High-resolution imaging of transitional cell carcinoma with optical coherence tomography: feasibility for the evaluation of bladder pathology. Br J Radiol 72:1170-1176, 1999. PubMed
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39. Patwari P, Weissman NJ, Boppart SA, Jesser C, Stamper D, Fujimoto JG, Brezinski ME. Assessment of coronary plaque with optical coherence tomography and high-frequency ultrasound. Am J Cardiol 85:641-644, 2000. PubMed
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40. Pitris C, Jesser CA, Boppart SA, Stamper DL, Brezinski ME, Fujimoto JG. Feasibility of optical coherence tomography for high resolution imaging of human gastrointestinal tract malignancies. J Gastroenterol 35:87-92, 2000. PubMed
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41. Li X, Boppart SA, Van Dam J, Mashimo H, Mutinga M, Drexler W, Klein M, Pitris C, Krinsky ML, Brezinski ME, Fujimoto JG. Optical coherence tomography: advanced technology for the endoscopic imaging of Barrett's esophagus. Endoscopy 32:921-930, 2000. PubMed
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42. Marks DL, Oldenburg AL, Reynolds JJ, Boppart SA. Study of an ultrahigh numerical aperture fiber continuum generation source for optical coherence tomography. Opt. Ltr. 27:2010-2012, 2002. n/a PDF
43. Marks Dl, Oldenburg AL, Reynolds JJ, Boppart SA. Digital algorithm for dispersion correction in optical coherence tomography for homogeneous and stratified media. Appl. Opt. 42:204-217, 2003. PubMed
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44. Zysk A, Reynolds JJ, Marks DL, Carney PS, Boppart SA. Projected index computed tomography. Opt. Letters 28:701-703, 2003. PubMed
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45. Oldenburg AL, Reynolds JJ, Marks DL, Boppart SA. Fast-Fourier-domain delay line for in vivo optical coherence tomography with a polygonal scanner. Apl. Opt., 42(22):4606, Aug, 2003. PubMed
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46. Marks DL, Oldenburg AL, Reynolds JJ, Boppart SA. Autofocus algorithm for dispersion correction in optical coherence tomography. Applied Optics 42:3038-3046, 2003. PubMed
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47. Lazebnik M, Marks DL, Potgieter K, Gillette R, Boppart SA. Functional optical coherence tomography for detecting neural activity through scattering changes. Optics Letters, 28(14):1218-1220, 2003. PubMed
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48. Lee TM, Toublan FJ, Sitafalwalla S, Oldenburg AL, Suslick KS, Boppart SA. Engineered microsphere contrast agents for optical coherence tomography. Optics Letters, 28(17): 1546-1548, Sept 2003. PubMed
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49. Toublan FJJ, Suslick KS, Boppart SA, Lee TM, Oldenburg AL. Modification of protein microspheres for biomedical application. Polymer Preprints, 44:185, 2003. n/a n/a
50. Xi C, Balberg M, Boppart SA, Raskin L. Use of DNA and peptide nucleic acid (PNA) molecular beacons for the detection and quantification of rRNA insolutions and in whole cells. Applied Environ Microbiol, 69(9): 5673-8, Sep 2003. PubMed
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51. Schaefer AW, Reynolds JJ, Marks DL, Boppart SA. Real-time digital signal processing-based optical coherence tomography and Doppler optical coherence tomography. IEEE Trans. Biomed. Engr. 51:186-190, 2004 PubMed
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52. Vinegoni C. Bredfeldt JS, Marks, Dl, Boppart SA. Nonlinear optical contrast enhancement for optical coherence tomography. Optics Express, 12:333-341, 2004.n/a PDF
53. Boppart SA, Luo W, Marks DL, Singletary KW. Optical coherence tomography: feasibility for basic research and image-guided surgery of breast cancer. Breast Cancer Research and Treatment, 84:85-97 2004. PubMed
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54. Marks DL, Boppart SA. Nonlinear interferometric vibrational imaging. Phys. Rev. Lett., 92:123905, 2004. PubMed
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55. Xi C, Marks DL, Parikh DS, Raskin L, Boppart SA. Structural and functional imaging of three-dimensional microfluidic mixers using optical coherence tomography. Proc. Natl Acad. Sci., 101:7516-7521, 2004 PubMed
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56. Xu C, Ye J, Marks DL, Boppart SA. Near-infrared dyes as constrast-enhancing agents for spectroscopic optical coherence tomography. Optics Letters, 29:1647-1649, 2004. PubMed
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57. Xu C, Boppart SA. Separation of absorption and scattering profiles in spectroscopic optical coherence tomography using a least-square algorithm. Optics Express, 12:4790-4803, 2004. n/a PDF
58. Marks DL, Carney PS, Boppart SA. Adaptive spectral apodization for side-lobe reduction in optical coherence tomography. J. Biomed. Optics, 9:1281-1287, 2004. PubMed Abstract PDF
59. Roach WP, Cain CP, Narayan DG, Worniallo E, Winter KP, Noojin GD, Stolarski DJ, DiCarlo CD, Boppart SA, Birngruber R, Fujimoto JG, Toth Ca. The retinal response of macacca mulatto to picosecond laser pulses of varying energy and spot-size. J. Biomed. Optics, 9:1288-1296, 2004. PubMed
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60. Marks DL, Vinegoni C, Bredfeldt JS, Boppart SA. Interferometric differentiation between resonant coherent anti-Stokes Raman scattering and nonresonant four-wave-mixing processes. Applied Phys. Lett., 85:5787-5789, 2004.n/a PDF
61. Tan W, Sendemir-Urkmez A, Fahrner LJ, Jamison R, Leckband DL, Boppart SA. Structural and functional optical imaging of three-dimensional engineered tissue development. Tissue Enginering, 10:1747-1756, 2004 PubMed
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62. Xu C, Kamalabadi F, Boppart SA. Comparative performance analysis of time-frequency distributions for spectroscopic optical coherence tomography. Applied Optics, 44:1813-1822, 2005. PubMed
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63. Bredfeldt JS, Marks DL, Vinegoni C, Hambir S, Dlott DA, Boppart SA. Molecularly-sensitive optical coherence tomography. Optics Letters, 30:495-497, 2005. PubMed
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64. Oldenburg AL, Gunther JR, Boppart SA. Imaging magnetically labeled cells with magnetomotive optical coherence tomography. Optics Letters, 30:747-749, 2005. PubMed
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65. Xi C, Raskin L, Boppart SA. Evaluation of microfluidic biosensor development using microscopic analysis of molecular beacon hybridization kinetics. Biomedical Microdevices, 7:7-12, 2005. PubMed
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66. Ralston T, Marks DL, Kamalabadi F, Boppart SA. Deconvolution methods for mitigation of transverse blurring in optical coherence tomography. IEEE Trans. Image Proc. Special Issue on Molecular and Cellular Bioimaging, 14:1254-1264, 2005. PubMed Abstract PDF
67. Marks DL, Ralston TS, Boppart SA. Speckle reduction by I-divergence regularization in optical coherence tomography. JOSA A, 22:2366-2371, 2005. PubMed Abstract PDF
68. Xu C, Carney PS, Boppart SA.  Wavelength-dependent scattering in spectroscopic optical coherence tomography.  Optics Express, 13:5450-5462, 2005. n/a PDF
69. Oldenburg AL, Toublan FJ, Suslick KS, Wei A, Boppart SA.  Magnetomotive contrast for in vivo optical coherence tomography.  Optics Express, 13:6597-6614, 2005. n/a PDF
70. Luo W, Nguyen FT, Zysk AM, Ralston TS, Brockenbrough J, Marks DL, Oldenburg AL, Boppart SA.  Optical biopsy of lymph node morphology using optical coherence tomography.  Technology in Cancer Research & Treatment, 4:539-547, 2005. PubMed Abstract PDF
71. Marks DL, Vinegoni C, Bredfeldt JS, Boppart SA.  Nonlinear interferometric vibrational imaging:  Efficient detection of coherent anti-Stokes Raman scattering.  Optics and Photonics News, 12:23, December 2005. n/a PDF
72. Vinegoni C, Ralston TS, Tan W, Luo W, Marks DL, Boppart SA.  Integrated structural and functional optical imaging combining spectral-domain optical coherence and multiphoton microscopy.  Appl. Phys. Lett., 88:053901, 2006. n/a PDF
73. Pasquesi JJ, Schlachter S, Boppart MD, Chaney E, Kaufman SJ, Boppart SA.  In vivo detection of exercised-induced ultrastructural changes in genetically-altered murine skeletal muscle using polarization-sensitive optical coherence tomography.  Optics Express, 14:1547-1556, 2006. n/a PDF
74. Xu C, Vinegoni C, Ralston TS, Luo W, Tan W, Boppart SA.  Spectroscopic spectral-domain optical coherence microscopy.  Opt. Lett., 31:1079-1081, 2006. PubMed Abstract PDF
75. Luo W, Marks DL, Ralston TS, Boppart SA.  Three-dimensional optical coherence tomography of the embryonic murine cardiovascular system.  J. Biomedical Opt. Special Issue on Cardiovascular Photonics, 11(2):021014, 2006. n/a PDF
76. Ko H-J, Tan W, Stack R, Boppart SA. Optical coherence elastography of engineered and developing tissue. Tissue Engineering, 12:63-73, 2006. PubMed Abstract PDF
77. Zysk AM, Chaney EJ, Boppart SA.  Refractive index of carcinogen-induced rat mammary tumours.  Phys. Med. Biol., 51(9):2165-77, 2006. PubMed Abstract PDF
78. Toublan FJJ, Boppart SA, Suslick KS.  Tumor targeting by surface modified microspheres. J. Am. Chem. Soc., 128:3472-3473, 2006. PubMed Abstract PDF
79. Ralston TS, Marks DL, Carney PS, Boppart SA.  Inverse scattering for optical coherence tomography.  JOSA A, 23(5):1027-1037, 2006. PubMed Abstract PDF
80. Jones GW, Marks DL, Vinegoni C, Boppart SA.  High-spectral-resolution coherent anti-Stokes Raman scattering with interferometrically-detected broadband chirped pulses.  Opt. Lett., 31(10):1543-1545, 2006. PubMed Abstract PDF
81. Zysk AM, Boppart SA.  Computational methods for analysis of human breast tumor tissue in optical coherence tomography images.  J. Biomedical Optics. 11(5):054015, 2006. PubMed Abstract PDF
82. Xi C, Marks DL, Schlachter S, Luo W, Boppart SA.  High-resolution three-dimensional imaging of biofilm development using optical coherence tomography.  J. Biomed. Opt. 11(3):034001-1-134001-6, 2006. PubMed Abstract PDF
83. Oldenburg AL, Hansen MN, Zweifel DA, Wei A, Boppart SA.  Plasmon-resonant gold nanorods as low backscattering albedo contrast agents for optical coherence tomography. Opt. Express 14(15):6724-6738, 2006. n/a PDF
84. Tan W, Oldenburg AL, Norman JJ, Desai TA, Boppart SA.  Optical coherence tomography of cell dynamics in three-dimensional tissue models.  Opt. Express, 14(16):7159-7171, 2006. n/a PDF
85. Marks DL.  A family of approximations spanning the Born and Rytov scattering series.  Opt. Express, 14(19):8837-8848, 2006. n/a PDF
86. Marks DL, Ralston TS, Carney PS, Boppart SA.  Inverse scattering for rotationally scanned optical coherence tomography.  J. Opt. Soc. Am. A, 23(10):2433-2439, 2006. PubMed Abstract PDF
87. Ralston TS, Marks DL, Boppart SA, Carney PS.  Inverse scattering for high-resolution interferometric microscopy.  Optics Letters, 31(24):3585-3587, 2006. PubMed Abstract PDF
88. Zysk AM, Adie SG, Armstrong JJ, Leigh MS, Paduch A, Sampson DD, Nguyen FT, Boppart SA. Needle-based refractive index measurement using low-coherence interferometry.  Optics Letters, 32(4):385-387, 2007. PubMed Abstract PDF
89. Ralston TS, Marks DL, Carney PS, Boppart SA. Interferometric synthetic aperture microscopy.  Nature Physics, 3:129-134, 2007. n/a PDF
90. Zysk AM and Boppart SA. Comment on "In vivo cancer diagnosis with optical spectroscopy and acoustically induced blood stasis using a murine Mca35 model," [Med. Phys. 33, 1623-1633 (2006)], Med. Phys., 3:1130, 2007. n/a PDF
91. Tan W, Vinegoni C, Norman JJ, Desai TA and Boppart SA. Imaging cellular responses to mechanical stimuli within three-dimensional tissue constructs. Microscopy Research and Technique, 70:361-371, 2007. PubMed
Abstract		 PDF
92. Marks DL, Ralston TS, Boppart SA and Carney PS. Inverse scattering for frequency-scanned full-field optical coherence tomography. J. Opt. Soc. Am. A, 24(4):1034-1041, 2007. PubMed
Abstract		 PDF
93. Zysk AM, Marks DL, Liu DY, Boppart SA. Needle-based reflection refractometry of scattering samples using coherence-gated detection. Optics Express, 15(8):4784-4794, 2007. n/a PDF
94. Davis BJ, Ralston TS, Marks DL, Boppart SA, Carney PS. Autocorrelation artifacts in optical coherence tomography and interferometric synthetic aperture microscopy. Optics Letters, 32(11):1441-1443, 2007. PubMed Abstract PDF
95. Choi JH, Nguyen FT, Barone PW, Heller DA, Moll AE, Patel D, Boppart SA, and Strano MS. Multimodal biomedical imaging with asymmetric single-walled carbon nanotube/iron oxide nanoparticle complexes. Nano Letters, 7(4):861-867, 2007. PubMed Abstract PDF
96. Davis BJ, Schlachter SC, Marks DL, Ralston TS, Boppart SA, and Carney PS. Nonparaxial vector-field modeling of optical coherence tomography and interferometric synthetic aperture microscopy. J. Opt. Soc. Am. A, 24(9):2527-2542, 2007. PubMed Abstract PDF
97. Zysk AM, Nguyen FT, Oldenburg AL, Marks DL, Boppart SA. Optical coherence tomography: a review of clinical development from bench to bedside. J. Biomed. Opt., 12(5):051403-1-051403-21, 2007. PubMed Abstract PDF
98. Tu H, Marks DL, Koh YL, Boppart SA. Stabilization of continuum generation from normally dispersive nonlinear optical fibers for a tunable broad bandwidth source for optical coherence tomography. Opt. Lett., 32(14):2037-2039, 2007. PubMed Abstract PDF
99. Tu H, Koh YL, Marks DL, Boppart SA. Localized waveguide formation in germanosilicate fiber transmitting femtosecond IR pulses. J. Opt. Soc. Am. B, 25(2):274-278, 2008. n/a PDF
100. Ralston TS, Marks DL, Carney PS, Boppart SA. Real-time interferometric synthetic aperture microscopy. Optics Express, 16(4):2555-2569, 2008. n/a PDF
101. Tu H, Marks DL, Jiang Z, Boppart SA. Photoscattering effect in supercontinuum-generating photonic crystal fiber. Applied Physics Letters, 92:061104-1-061104-3, 2008. n/a PDF
102. Marks DL, Schlachter SC, Zysk AM, Boppart SA. Group refractive index reconstruction with broadband interferometric confocal microscopy. J. Opt. Soc. Am. A, 25(5):1156-1164, 2008. PubMed Abstract PDF
103. Tu H, Jiang Z, Marks DL , Boppart SA. Anomalous bending effect in photonic crystal fibers. Opt. Exp., 16(8):5617-5622, 2008. n/a PDF
104. Liang X, Oldenburg AL, Crecea V, Chaney EJ, Boppart SA. Optical micro-scale mapping of dynamic biomechanical tissue properties. Optics Express, 16:11052-11065, 2008. PubMed Abstract PDF
105. Oldenburg AL, Crecea V, Rinne SA, Boppart SA. Phase-resolved magnetomotive OCT for imaging nanomolar concentrations of magnetic nanoparticles in tissues. Optics Express, 16:11525-11539, 2008. PubMed Abstract PDF
106. Chelliyil RG, Ralston TS, Marks DL, Boppart SA. High-speed processing architecture for spectral-domain optical coherence microscopy. J Biomedical Optics, 13:044013, 2008. PubMed Abstract PDF
107. Marks DL, Chaney EJ, Boppart SA. Plastination of tissue samples as three-dimensional models for optical instrument characterization. Optics Express, 16:16272-16283, 2008. PubMed Abstract PDF
108. Ralston TS, Adie SG, Marks DL, Davis BJ, Carney PS, Boppart SA. Real-time interferometric synthetic aperture microscopy for clinical applications. Optics in 2008, Optics and Photonics News, 19:32, 2008. PubMed Abstract PDF
109. Ding H, Nguyen FT, Boppart SA, Popescu G. Fourier transform light scattering of inhomogeneous and dynamic structures. Phys. Rev. Lett., 101:238102, 2008. PubMed Abstract PDF
110. Marks DL, Davis BJ, Boppart SA, Carney PS. Partially coherent illumination for inverse scattering full-field interferometric synthetic aperture microscopy. J. Opt. Soc. Am. A, 26(2):376-386, 2009. PubMed Abstract PDF
111. Ahmad A, Adie SG, Chaney EJ, Sharma U, Boppart SA. Cross-correlation-based image acquisition technique for manually-scanned optical coherence tomography. Optics Express, 17:8125-8136, 2009. PubMed Abstract PDF
112. Tu H and Boppart SA. Optical frequency up-conversion by supercontinuum-free widely-tunable fiber-optic Cherenkov radiation. Optics Express, 17:9858-9872, 2009. PubMed Abstract PDF
113. Ding H, Nguyen FT, Boppart SA, Popescu G. Optical properties of tissues quantified by Fourier transform light scattering. Optics Letters, 34:1372-1374, 2009. PubMed Abstract PDF
114. Tu H, Jiang Z, Marks DL, Boppart SA. Intermodal four-wave mixing from femtosecond pulse-pumped photonic crystal fiber. Applied Physics Letters, 94:101109, 2009. PubMed Abstract PDF
115. Tu H, Liang X, Marks DL, Boppart SA. Emergence of self-organized long-period fiber gratings in supercontinuum-generating optical fibers. Optics Letters, 34(5):668-670, 2009. PubMed Abstract PDF
116. Graf BW, Jiang Z, Tu H, Boppart SA. Dual-spectrum laser source based on fiber continuum generation for integrated optical coherence and multiphoton microscopy. J Biomed Opt, 14(3):034019, 2009. PubMed Abstract PDF
117. Marks DL, Geddes J, Boppart SA. Molecular identification by generating coherence between molecular normal modes using stimulated Raman scattering. Optics Letters, 34:1756-1758, 2009. PubMed Abstract PDF
118. Rezaeipoor R, Chaney EJ, Oldenburg AL, Boppart SA. Expression order of alpha v and beta 3 integrin subunits in the N-methyl-N-nitrosourea (MNU)-induced rat mammary tumor model. Cancer Investigation, 27:496-503, 2009. PubMed Abstract PDF
119. Graf BW, Ralston TS, Ko H-J, Boppart SA. Detecting intrinsic scattering changes correlated to neuron action potentials using optical coherence imaging. Optics Express, 17(16):13447-13457, 2009. PubMed Abstract PDF
120. Zysk AM, Nguyen FT, Chaney EJ, Kotynek JG, Oliphant UJ, Bellafiore FJ, Rowland KM, Johnson PA, Boppart SA. Clinical feasibility of microscopically-guided breast needle biopsy using a fiber optic probe with computer-aided detection. Technology in Cancer Research and Technology, 8:315-322, 2009. PubMed Abstract PDF
121. Tu H, Boppart SA. Ultraviolet-visible non-supercontinuum ultrafast source enabled by switching single silicon strand-like photonic crystal fibers. Opt. Exp., 17(20):17983-17988, 2009. PubMed Abstract PDF
122. Liang X, Orescanin M, Toohey KS, Insana MF, Boppart SA. Acoustomotive optical coherence elastography for measuring material mechanical properties. Optics Letters, 34(19):2894-2896, 2009. PubMed Abstract PDF
123. Nguyen FT, Zysk AM, Chaney EJ, Kotynek JG, Oliphant UJ, Bellafiore FJ, Rowland KM, Johnson PA, Boppart SA. Intraoperative evaluation of breast tumor margins with optical coherence tomography. Cancer Research, 69:8790-8796, 2009. PubMed Abstract PDF
124. Liang X, Crecea V, Orenscanin M, Insana MF, Boppart SA. Measurements of biomechanics by dynamic optical coherence elastography. Optics in 2009 - Optics and Photonics News, Optical Society of America, pg. 18, 2009. n/a n/a
125. Geddes JB III, Marks DL, Boppart SA. Design of matched optical pulses for coherent Raman imaging. Optics in 2009 - Optics and Photonics News, Optical Society of America, pg. 31, 2009. n/a PDF
126. Crecea V, Oldenburg AL, Liang X, Ralston TS, Boppart SA. Magnetomotive nanoparticle transducers for optical rheology of viscoelastic materials. Optics Express, 17:23114-23122, 2009. n/a PDF
127. Rezaeipoor R, Oldenburg AL, Adie SG, Chaney EJ, Rinne SA, Boppart SA. Fc-directed antibody conjugation of magnetic nanoparticles for ultra-sensitive and specific molecular targeting. J Innovative Optical Health Sciences, 2:387-396, 2009. n/a PDF
128. Oldenburg AL, Boppart SA. Resonant acoustic spectroscopy of soft tissues using embedded magnetomotive nanotransducers and optical coherence tomography. Phys. Med. Biol., 55:1189-1201, 2010. PubMed Abstract PDF
129. Nguyen FT, Zysk AM, Chaney EJ, Adie SG, Kotynek JG, Oliphant UJ, Bellafiore FJ, Rowland KM, Johnson PA, Boppart SA.  Optical coherence tomography: The intraoperative assessment of lymph nodes in breast cancer.  IEEE Engineering in Medicine & Biology Magazine, 29:63-70, 2010. PubMed Abstract PDF
130. Liang X, Boppart SA. Biomechanical properties of in vivo human skin by dynamic optical coherence elastography. IEEE Trans. Biomed. Engr., 57:953-959, 2010. PubMed Abstract PDF
131. John R, Rezaeipoor R, Adie SG, Chaney EJ, Oldenburg AL, Marjanovic M, Halder JP, Sutton B, Boppart SA. In vivo magnetomotive optical molecular imaging using targeted magnetic nanoprobes.  PNAS, 107:8085-8090, 2010. PubMed Abstract PDF
132. Ahmad A, Adie SG, Wang M, Boppart SA. Sonification of optical coherence tomography data and images.  Optics Express, 18:9934-9944, 2010. PubMed Abstract PDF
133. Ralston TS, Adie SG, Marks DL, Boppart SA, Carney PS. Cross-validation of interferometric synthetic aperture microscopy and optical coherence tomography.  Optics Letters, 35:1683-1685, 2010. PubMed Abstract PDF
134. Chaney EJ, Tang L, Tong R, Cheng J, Boppart SA. Lymphatic biodistribution of polylactide nanoparticles. Molecular Imaging, 9:153-162, 2010. PubMed Abstract PDF
135. Chowdary PD, Benalcazar WA, Jiang Z, Marks DL, Boppart SA, Gruebele M. High speed nonlinear interferometric vibrational analysis of lipids by spectral decomposition.  Analytical Chemistry, 82:3812-3818, 2010. PubMed Abstract PDF
136. Jiang Z, Leaird DE, Long CM, Boppart SA, Weiner AM. Optical arbitrary waveform characterization using linear spectrograms. Optics Communications, 283:3017-3021, 2010. n/a PDF
137. John R, Chaney EJ, Boppart SA. Dynamics of magnetic nanoparticle-based contrast agents in tissues tracked using magnetomotive optical coherence tomography.  IEEE J. Selected Topics Quantum Elect., 16:691-697, 2010. n/a PDF
138. Liang X, Adie SG, John R, Boppart SA. Dynamic spectral-domain optical coherence elastography for tissue characterization.  Optics Express, 18:14183-14190, 2010. PubMed Abstract PDF
139. Benalcazar WA, Chowdary PD, Jiang Z, Marks DL, Chaney EJ, Gruebele M, Boppart SA. High-speed nonlinear interferometric vibrational imaging of biological tissue with comparison to Raman microscopy. IEEE J. Sel. Topics Quantum Elect., 16:824-832, 2010. n/a PDF
140. Shin S, Sharma U, Tu H, Jung W, Boppart SA. Characterization and analysis of relative intensity noise in broadband optical sources for optical coherence tomography. IEEE Photonics Technology Letters, 22:1057-1059, 2010. n/a PDF
141. Graf BW, Adie SG, Boppart SA.  Correction of coherence gate curvature in high numerical aperture optical coherence imaging.  Optics Letters, 35:3120-3122, 2010. PubMed Abstract PDF
142. Tu H, Shin S, John R, Boppart SA.  Long-period fiber gratings spontaneously written by a mechanism markedly different from Hill grating formation.  Applied Physics Letters, 97:121104, 2010. PubMed Abstract PDF
143. Nguyen CT, Tu H, Chaney EJ, Stewart CN, Boppart SA.  Non-invasive optical interferometry for the assessment of biofilm growth in the middle ear.  Biomedical Optics Express, 1:1104-1116, 2010. PubMed Abstract PDF
144. Liang X, Crecea V, Boppart SA.  Dynamic optical coherence elastography:  A review.  J Innovative Optical Health Sciences, 3:221-233, 2010. n/a PDF
145. Chowdary PD, Benalcazar WA, Jiang Z, Chaney EJ, Marks DL, Gruebele M, Boppart SA.  Molecular histopathology by nonlinear interferometric vibrational imaging.  Cancer Research (Invited Cover Figure), 70:9562-9569, 2010. PubMed Abstract PDF
146. Adie SG, Liang X, Kennedy BF, John R, Sampson DD, Boppart SA.  Spectroscopic optical coherence elastography.  Optics Express, 18:25519-25534, 2010. PubMed Abstract PDF
147. Jung W, Benalcazar W, Sharma U, Ahmad A, Tu H, Boppart SA.  Numerical analysis of gradient index lens-based optical coherence tomography imaging probes.  J. Biomed. Optics, 15:066027, 2010. PubMed Abstract PDF
148. Tu H, Liu Y, Laegsgaard J, Sharma U, Siegel M, Kopf D, Boppart SA.  Scalar generalized nonlinear Schrodinger equation-quantified continuum generation in an all-normal dispersion photonic crystal fiber for broadband coherent optical sources.  Optics Express, 18:27872-27884, 2010. PubMed Abstract PDF
149. Chaney EJ, Nguyen CT, Boppart SA.  Novel method for non-invasive induction of a middle-ear biofilm in the rat.  Vaccine, 29:1628-1633, 2011. n/a PDF
150. Jung W, Kim J, Jeon M, Chaney EJ, Stewart CN, Boppart SA.  Handheld optical coherence tomography scanner for primary care diagnostics.  IEEE Transactions on Biomedical Engineering, Invited Cover Figure, 58:741-744, 2011. PubMed Abstract PDF
151. Jeon M, Kim J, Jung U, Lee C, Jung W, Boppart SA.  Full range k-domain linearization in spectral domain optical coherence tomography.  Applied Optics, 50:1158-1163, 2011. PubMed Abstract PDF
152. Kennedy BF, Liang X, Adie SG, Gerstmann DK, Quirk BC, Boppart SA, Sampson DD.  In vivo three-dimensional optical coherence elastography.  Optics Express, 19:6623-6634, 2011. n/a PDF
153. John R, Nguyen FT, Kolbeck KJ, Chaney EJ, Marjanovic M, Suslick KS, Boppart SA.  Targeted multi-functional multi-modal protein-shell microspheres as cancer imaging contrast agents.  Molecular Imaging and Biology, In press, DOI: 10.1007/s11307-011-0473-7, 2011. n/a PDF
154. Ding H, Liang X, Wang Z, Boppart SA, Tangella K, Popescu G.  Measuring the scattering parameters of tissues from quantitative phase imaging of thin slices.  Optics Letters, 36:2281-2283, 2011. n/a PDF
155. Tu H, Liu Y, Turchinovich D, Boppart SA.  Compression of fiber supercontinuum pulses to the Fourier limit in a high-numerical aperture focus.  Optics Letters, 36:2315-2317, 2011. n/a PDF
156. Graf GW, Boppart SA.  Multimodal in vivo skin imaging with integrated optical coherence and multiphoton microscopy.  IEEE J. Selected Topics in Quantum Electronics – Biophotonics II, In press, 2011. n/a PDF
157. Benalcazar WA, Jung W, Boppart SA.  Aberration characterization for the optimal design of high-resolution endoscopic optical coherence tomography catheters.  Optics Letters, 37:1100-1102, 2012. n/a PDF
158. Tu H, Liu Y, Laegsgaard J, Turchinovich D, Siegel M, Kopf D, Li H, Gunaratne T, Boppart SA.  Cross-validation of theoretically-quantified fiber continuum generation and absolute pulse measurement by MIIPS for a broadband coherently-controlled optical source.  Applied Physics B, 106:379-384, 2012. n/a PDF
159. Liu Y, Tu H, Benalcazar WA, Chaney EJ, Boppart SA.  Multimodal nonlinear microscopy by shaping a fiber supercontinuum from 900 to 1160 nm.  IEEE J. Selected Topics in Quantum Mechanics – Biophotonics I, In press, 2011. n/a n/a
160. John R, Adie SG, Chaney EJ, Marjanovic M, Tangella KV, Boppart SA.  Three-dimensional optical coherence tomography for optical biopsy of lymph nodes and assessment of metastatic disease.  Annals of Surgical Oncology, In press, 2011. n/a n/a
161. Tu H, Liu Y, Liu X, Turchinovich D, Laegsgaard J, Boppart SA.  Nonlinear polarization dynamics in a weakly birefringent all-normal dispersion photonic crystal fiber: toward a practical coherent fiber supercontinuum laser.  Optics Express, 20:1113-1128, 2012. n/a PDF
162. Boulos SP, Prigozhin MB, Liu Y, Wirth AJ, Boppart SA, Gruebele M, Murphy CJ.  The gold nanorod-biology interface: from proteins to cells to tissue.  Current Physical Chemistry, In press, 2012. n/a n/a
163. Benalcazar WA, Jung W, Boppart SA.  Aberration characterization for the optimal design of high-resolution endoscopic OCT catheters.  Submitted, 2011. n/a n/a
164. Benalcazar WA, Carney PS, Boppart SA.  Inverse problem for the interferometric detection of coherent anti-Stokes Raman scattering generated by the use of femtosecond chirped pulses.  Submitted, 2011. n/a n/a
165. Nguyen CT, Jung W, Kim J, Chaney EJ, Novak M, Stewart CN, Boppart SA.  Non-invasive in vivo optical detection of biofilm in the human middle ear.  Accepted PNAS, 2011. n/a n/a